abafaraubabebfbnbpbsc1caclcrctcyd2dedidteiemepfufxgagphoidsissj9jilamanroipapdpgpipmpnptspupyrirpscsestsnsospsutctiu1u2utvlwcz9p2vrid
Chlorophyll content is one of the most important physiological traits as it is closely related to leaf photosynthesis and crop yield potential. So far, few genes have been reported to be involved in natural variation of chlorophyll content in rice (Oryza Wang, Quanxiu; Xie, Weibo; Xing, Hongkun; Yan, Ju; Meng, Xiangzhou; Li, Xinglei; Fu, Xiangkui; Xu, Jiuyue; Lian, Xingming; Yu, Sibin; Xing, Yongzhong; Wang, GongweiWang, QX; Xie, WB; Xing, HK; Yan, J; Meng, XZ; Li, XL; Fu, XK; Xu, JY; Lian, XM; Yu, SB; Xing, YZ; Wang, GW946[Wang, Gongwei] Huazhong Agr Univ, Natl Key Lab CrZhang HL, 2011, THEOR APPL GENET, V122, P49, DOI 10.1007/s00122-010-1421-7; Wu ZM, 2007, PLANT PHYSIOL, V145, P29, DOI 10.1104/pp.107.100321; Tan Cong, 2012, Yichuan, V34, P901, DOI 10.3724/SP.J.1005.2012.00901; Jiang SK, 2012, J HERED, V103, P720, DOI 10chlorophyl10.1016/j.Article1752-9867gwwang@mail.hzau.edu.cn957Ministry of Agriculture of China [2011ZX08009-002, 2013ZX08009-002]; fundamental research funds for This work was supported by grants from the Ministry of Agriculture of China (2011ZX08009-002 and 201CJ5UZHARVESTING COMPLEX-II; PHOTOSYNTHETIC EFFICIENCY; LEAF SENESCENCE; INCREASES YIELD; ORYZA-SATIVA; STAY-GREEN; DEGRADATION; TRAITS; INDICA; NAL16MOL PLANTMol. Plant.English42Xie, Weibo/0000-0002-2768-3572600 TECHNOLOGY SQUARE, 5TH FLOOR, CAMBRIDGE, MA 02139 USA1-Jun12CAMBRIDGE25747843JCELL PRESS2015Xie, Weibo/B-3771-2008Wang, GW (reprint author), Huazhong Agr Univ, Natl Key Lab Crop Genet Improvement, Wuhan 430070, Peoples R China.Biochemistry & Molecular Biology; Plant Sciences1674-2052MOLECULAR PLANT3Genetic Architecture of Natural Variation in Rice Chlorophyll Content Revealed by a Genome-Wide Association Study2445WOS:0003555586000108Biochemistry & Molecular Biology; Plant Sciences3101
Huang, Xuehui; Zhao, Qiang; Han, BinHuang, XH; Zhao, Q; Han, B958[Huang, Xuehui; Zhao, Qiang; Han, Bin] Chinese AcaHuang XH, 2012, NATURE, V490, P497, DOI 10.1038/nature11532; Huang XH, 2010, NAT GENET, V42, P961, DOI 10.1038/ng.695; Ma JX, 2004, P NATL ACAD SCI USA, V101, P12404, DOI 10.1073/pnas.0403715101; Wing RA, 2005, PLANT MOL BIOL, V59, P53, DOI 10.1007/s1110310.1016/j.Letter1752-9867xhhuang@ncgr.ac.cn960CJ5UZORYZA-GLABERRIMA; CULTIVATED RICE; MAP; ALIGNMENT; SEQUENCE6MOL PLANTMol. Plant.English10600 TECHNOLOGY SQUARE, 5TH FLOOR, CAMBRIDGE, MA 02139 USA1-Jun3CAMBRIDGE25615591JCELL PRESS2015Huang, XH (reprint author), Chinese Acad Sci, Natl Ctr Gene Res, Inst Plant Physiol & Ecol, Shanghai Inst Biol Sci, Shanghai 200233, Peoples R China.Biochemistry & Molecular Biology; Plant Sciences1674-2052MOLECULAR PLANT0Comparative Population Genomics Reveals Strong Divergence and Infrequent Introgression between Asian and African Rice912WOS:0003555586000118Biochemistry & Molecular Biology; Plant Sciences0102
We identified the Magnaporthe oryzae avirulence effector AvrPi9 cognate to rice blast resistance gene Pi9 by comparative genomics of requisite strains derived from a sequential planting method.AvrPi9 encodes a small secreted protein that appears to localiWu, Jun; Kou, Yanjun; Bao, Jiandong; Li, Ya; Tang, Mingzhi; Zhu, Xiaoli; Ponaya, Ariane; Xiao, Gui; Li, Jinbin; Li, Chenyun; Song, Min-Young; Cumagun, Christian Joseph R.; Deng, Qiyun; Lu, Guodong; Jeon, Jong-Seong; Naqvi, Naweed I.; Zhou, BoWu, J; Kou, YJ; Bao, JD; Li, Y; Tang, MZ; Zhu, XL; Ponaya, A; Xiao, G; Li, JB; Li, CY; Song, MY; Cumagun, CJR; Deng, QY; Lu, GD; Jeon, JS; Naqvi, NI; Zhou, B1463[Wu, Jun; Deng, Qiyun] Cent S Univ, Grad Sch, StatAdhikari BN, 2013, PLOS ONE, V8, DOI 10.1371/journal.pone.0075072; Amyotte SG, 2012, BMC GENOMICS, V13, DOI 10.1186/1471-2164-13-314; Dean RA, 2005, NATURE, V434, P980, DOI 10.1038/nature03449; Zhou B, 2006, MOL PLANT MICROBE IN, V19, P1216, DOI 10.1094/MAvrPi9; Ma10.1111/npArticle1469-8137b.zhou@irri.org1475National 863 project of China [2012AA101103]; 973 project of China [2012CB722504, 2012CB114001]; NatWe gratefully acknowledge Dr Seong-Sook Han at Crop Environment Division National Institute of Crop CH8AGARMS-RACE; QUANTITATIVE PCR; PIZ-T; GENE; FUNGUS; GRISEA; PROTEIN; PATHOGEN; ARABIDOPSIS; EVOLUTION4NEW PHYTOLNew Phytol.English54111 RIVER ST, HOBOKEN 07030-5774, NJ USAJUN13HOBOKEN25659573JWILEY-BLACKWELL2015Zhou, B (reprint author), Zhejiang Acad Agr Sci, Inst Virol & Biotechnol, State Key Lab Breeding Base Zhejiang Sustainable, Hangzhou 310021, Zhejiang, Peoples R China.Plant Sciences0028-646XNEW PHYTOLOGIST3Comparative genomics identifies the Magnaporthe oryzae avirulence effector AvrPi9 that triggers Pi9-mediated blast resistance in rice2147WOS:000354257400025206Plant Sciences3103
Floral organ identity in plants is controlled by floral homeotic A/B/C/D/E-class genes. In Arabidopsis thaliana, several epigenetic repressors that regulate these floral organ identity genes have been characterized. However, the roles of epigenetic factorZheng, Ming; Wang, Yihua; Wang, Yunlong; Wang, Chunming; Ren, Yulong; Lv, Jia; Peng, Cheng; Wu, Tao; Liu, Kai; Zhao, Shaolu; Liu, Xi; Guo, Xiuping; Jiang, Ling; Terzaghi, William; Wan, JianminZheng, M; Wang, YH; Wang, YL; Wang, CM; Ren, YL; Lv, J; Peng, C; Wu, T; Liu, K; Zhao, SL; Liu, X; Guo, XP; Jiang, L; Terzaghi, W; Wan, JM1476[Zheng, Ming; Wang, Yihua; Wang, Yunlong; Wang, ChCalonje M, 2008, PLANT CELL, V20, P277, DOI 10.1105/tpc.106.049957; MIZUKAMI Y, 1992, CELL, V71, P119, DOI 10.1016/0092-8674(92)90271-D; Toriba T, 2014, PLANT J, V77, P616, DOI 10.1111/tpj.12411; Whipple CJ, 2004, DEVELOPMENT, V131, P6083, DOI 10.1242/devDEFORMED F10.1111/npArticle1469-8137wanjm@njau.edu.cn1490National 973 Program [2011CB100102]; 863 Program of China [2014AA10A604-4]; National Science and TecThis research was supported by grants from the National 973 Program (2011CB100102), the 863 Program CH8AGMADS-BOX GENES; POLYCOMB-GROUP GENE; FLOWER DEVELOPMENT; DROOPING-LEAF; ECTOPIC EXPRESSION; AGAMOUS SUBFAMILY; MERISTEM FATE; REPRODUCTIVE DEVELOPMENT; ARABIDOPSIS-THALIANA; FUNCTIONAL-ANALYSIS4NEW PHYTOLNew Phytol.English76111 RIVER ST, HOBOKEN 07030-5774, NJ USAJUN15HOBOKEN25675970JWILEY-BLACKWELL2015Wan, JM (reprint author), Nanjing Agr Univ, Jiangsu Plant Gene Engn Res Ctr, State Key Lab Crop Genet & Germplasm Enhancement, Nanjing 210095, Jiangsu, Peoples R China.Plant Sciences0028-646XNEW PHYTOLOGIST0DEFORMED FLORAL ORGAN1 (DFO1) regulates floral organ identity by epigenetically repressing the expression of OsMADS58 in rice (Oryza sativa)1021WOS:000354257400026206Plant Sciences0104
Numerous studies have argued that environmental variations may contribute to evolution through the generation of novel heritable variations via meiotic recombination, which plays a crucial role in crop domestication and improvement. Rice is one of the mosSi, Weina; Yuan, Yang; Huang, Ju; Zhang, Xiaohui; Zhang, Yanchun; Zhang, Yadong; Tian, Dacheng; Wang, Cailin; Yang, Yonghua; Yang, SihaiSi, WN; Yuan, Y; Huang, J; Zhang, XH; Zhang, YC; Zhang, YD; Tian, DC; Wang, CL; Yang, YH; Yang, SH1491[Si, Weina; Yuan, Yang; Huang, Ju; Zhang, Xiaohui;Muyle A, 2011, MOL BIOL EVOL, V28, P2695, DOI 10.1093/molbev/msr104; Huang XH, 2012, NATURE, V490, P497, DOI 10.1038/nature11532; Kuang H, 2004, PLANT CELL, V16, P2870, DOI 10.1105/tpc.104.025502; Yang SH, 2006, PLANT MOL BIOL, V62, P181, DOI 10.1007/s111crossover;10.1111/npArticle1469-8137yangyh@nju.edu.cn; sihaiyang@nju.edu.cn1502National Natural Science Foundation of China (NSFC) [91331205, 31271678, J1103512, J1210026]; NSFC oThis work was supported by the National Natural Science Foundation of China (NSFC) (91331205, 312716CH8AGDISEASE RESISTANCE GENES; ARABIDOPSIS-THALIANA; CROSSING-OVER; HOMOLOGOUS RECOMBINATION; GENOME; CONVERSION; RATES; POPULATIONS; EVOLUTION; REVEALS4NEW PHYTOLNew Phytol.English61111 RIVER ST, HOBOKEN 07030-5774, NJ USAJUN12HOBOKEN25664766JWILEY-BLACKWELL2015Yang, SH (reprint author), Nanjing Univ, Sch Life Sci, State Key Lab Pharmaceut Biotechnol, Nanjing 210093, Jiangsu, Peoples R China.Plant Sciences0028-646XNEW PHYTOLOGIST5Widely distributed hot and cold spots in meiotic recombination as shown by the sequencing of rice F-2 plants2335WOS:000354257400027206Plant Sciences5105
Rice inflorescence meristem (IM) activity is essential for panicle development and grain production. How chromatin and epigenetic mechanisms regulate IM activity remains unclear. Genome-wide analysis revealed that in addition to genes involved in the vegeLiu, Xiaoyun; Zhou, Shaoli; Wang, Wentao; Ye, Yiran; Zhao, Yu; Xu, Qiutao; Zhou, Chao; Tan, Feng; Cheng, Saifeng; Zhou, Dao-XiuLiu, XY; Zhou, SL; Wang, WT; Ye, YR; Zhao, Y; Xu, QT; Zhou, C; Tan, F; Cheng, SF; Zhou, DX1428[Liu, Xiaoyun; Zhou, Shaoli; Wang, Wentao; Ye, YirWang LP, 2009, CELL RES, V19, P598, DOI 10.1038/cr.2009.36; Margueron R, 2011, NATURE, V469, P343, DOI 10.1038/nature09784; Pien S, 2007, BBA-GENE STRUCT EXPR, V1769, P375, DOI 10.1016/j.bbaexp.2007.01.010; Qi WW, 2011, PLANT PHYSIOL, V157, P216, DOI 10.110.1105/tpArticle1532-298Xdao-xiuzhou@u-psud.fr1444National Science Foundation of China [31371241]; 863 Key Project "Rice Functional Genomics" of the CWe thank Qinglu Zhang and Xianghua Li for help in field experiments and management. This work was suCM4UGPOLYCOMB-GROUP PROTEINS; SOLID-PHASE EXTRACTION; FLOWERING-LOCUS-T; MADS BOX GENES; PLANT DEVELOPMENT; SPIKELET DEVELOPMENT; TRITHORAX PROTEINS; H3K4 DEMETHYLASE; FLORAL MERISTEM; GENOME-WIDE5PLANT CELLPlant CellEnglish70Shaoli, Zhou/0000-0001-9111-159815501 MONONA DRIVE, ROCKVILLE, MD 20855 USAMAY17ROCKVILLE25957386JAMER SOC PLANT BIOLOGISTS2015Zhou, DX (reprint author), Huazhong Agr Univ, Natl Key Lab Crop Genet Improvement, Wuhan 430070, Peoples R China.Biochemistry & Molecular Biology; Plant Sciences; Cell Biology1040-4651PLANT CELL1Regulation of Histone Methylation and Reprogramming of Gene Expression in the Rice Inflorescence Meristem2427WOS:00035767990000527Biochemistry & Molecular Biology; Plant Sciences; Cell Biology1106
Lowland rice (Nipponbare) and upland rice (Gaoshan 1) that are comparable under normal and moderate drought conditions showed dramatic differences in severe drought conditions, both naturally occurring long-term drought and simulated rapid water deficits.Shi, Lu; Guo, Miaomiao; Ye, Nenghui; Liu, Yinggao; Liu, Rui; Xia, Yiji; Cui, Suxia; Zhang, JianhuaShi, L; Guo, MM; Ye, NH; Liu, YG; Liu, R; Xia, YJ; Cui, SX; Zhang, JH951[Shi, Lu] Natl Ctr Nanosci & Technol China, CAS KeYoshida T, 2010, PLANT J, V61, P672, DOI 10.1111/j.1365-313X.2009.04092.x; Hou SJ, 2008, TALANTA, V76, P798, DOI 10.1016/j.talanta.2008.04.041; Bray EA, 2002, PLANT CELL ENVIRON, V25, P153, DOI 10.1046/j.1365-3040.2002.00746.x; Wang HG, 2007, J INTEGR PLAABA accumu10.1093/pcArticle1471-9053jhzhang@cuhk.edu.hk964Shenzhen Overseas Talents Innovation and Entrepreneurship Funding Scheme [The Peacock Scheme]; NatioThis work was supported by the Shenzhen Overseas Talents Innovation and Entrepreneurship Funding SchCJ2KSLOW WATER POTENTIALS; ABSCISIC-ACID ABA; GENE-EXPRESSION; LEAF GROWTH; HYDRAULIC CONDUCTIVITY; PHYSIOLOGICAL-ROLE; STRESS; LEAVES; MAIZE; RESPONSES5PLANT CELL PHYSIOLPlant Cell Physiol.English47GREAT CLARENDON ST, OXFORD OX2 6DP, ENGLANDMAY14OXFORD25735958JOXFORD UNIV PRESS2015Zhang, JH (reprint author), Chinese Univ Hong Kong, Shenzhen Res Inst, Shenzhen, Peoples R China.Plant Sciences; Cell Biology0032-0781PLANT AND CELL PHYSIOLOGY2Reduced ABA Accumulation in the Root System is Caused by ABA Exudation in Upland Rice (Oryza sativa L. var. Gaoshan1) and this Enhanced Drought Adaptation1730WOS:00035531390001356Plant Sciences; Cell Biology3107
NO generated by nitrate reductase plays a pivotal role in improving N-use efficiency by increasing lateral root initiation and inorganic N uptake, representing a strategy for rice to adapt to fluctuating nitrate supply. Increasing evidence shows that partSun, Huwei; Li, Jiao; Song, Wenjing; Tao, Jinyuan; Huang, Shuangjie; Chen, Si; Hou, Mengmeng; Xu, Guohua; Zhang, YaliSun, HW; Li, J; Song, WJ; Tao, JY; Huang, SJ; Chen, S; Hou, MM; Xu, GH; Zhang, YL2449[Sun, Huwei; Li, Jiao; Tao, Jinyuan; Huang, ShuangSong WJ, 2013, ANN BOT-LONDON, V112, P1383, DOI 10.1093/aob/mct212; Manoli A, 2014, J EXP BOT, V65, P185, DOI 10.1093/jxb/ert358; Bright J, 2006, PLANT J, V45, P113, DOI 10.1111/j.1365-313X.2005.02615.x; Gupta KJ, 2011, TRENDS PLANT SCI, V16, P160, DOI 10Lateral ro10.1093/jxArticle1460-2431ylzhang@njau.edu.cn2459Ministry of Science and Technology of China [2011CB100302]; National Nature Science Foundation of ChThis work was funded by the Ministry of Science and Technology of China (no. 2011CB100302), the NatiCI4SBARABIDOPSIS-THALIANA; USE EFFICIENCY; SYSTEM ARCHITECTURE; REGULATORY GENES; PLANT-RESPONSES; NUTRIENT STRESS; AUXIN TRANSPORT; IRON-DEFICIENCY; WHITE LUPIN; AVAILABILITY9J EXP BOTJ. Exp. Bot.English90GREAT CLARENDON ST, OXFORD OX2 6DP, ENGLANDMAY11OXFORD25784715JOXFORD UNIV PRESS2015xu, guohua/J-1840-2012Zhang, YL (reprint author), Nanjing Agr Univ, Minist Agr, State Key Lab Crop Genet & Germplasm Enhancement, Key Lab Plant Nutr & Fertilizat Low Middle Reache, Nanjing 210095, Jiangsu, Peoples R China.Plant Sciences0022-0957JOURNAL OF EXPERIMENTAL BOTANY2Nitric oxide generated by nitrate reductase increases nitrogen uptake capacity by inducing lateral root formation and inorganic nitrogen uptake under partial nitrate nutrition in rice3165WOS:00035474220000766Plant Sciences3108
It is well established that both salt and reactive oxygen species (ROS) stresses are able to increase the concentration of cytosolic free Ca2+ ([Ca2+](i)), which is caused by the flux of calcium (Ca2+). However, the differences between these two processesZhang, Yanyan; Wang, Yifeng; Taylor, Jemma L.; Jiang, Zhonghao; Zhang, Shu; Mei, Fengling; Wu, Yunrong; Wu, Ping; Ni, JunZhang, YY; Wang, YF; Taylor, JL; Jiang, ZH; Zhang, S; Mei, FL; Wu, YR; Wu, P; Ni, J2535[Zhang, Yanyan; Jiang, Zhonghao; Zhang, Shu; Mei, Chen SY, 2003, PLANT J, V36, P105, DOI 10.1046/j.1365-313X.2003.01860.x; Munnik T, 1998, BBA-LIPID LIPID MET, V1389, P222, DOI 10.1016/S0005-2760(97)00158-6; Qin C, 2013, PLANT CELL PHYSIOL, V54, P129, DOI 10.1093/pcp/pcs159; Miyawaki A, 1999, P NATL ACADAequorin; 10.1093/jxArticle1460-2431nijun@hznu.edu.cn2545National Natural Science Foundation of China [31301000]; Zhejiang Provincial Natural Science FoundatWe thank Qilang Zhu (Hangzhou Normal University, China) for technical assistance in RT-PCR. We also CI4SBARABIDOPSIS-THALIANA; CA2+ SIGNALS; PLANTS; STRESS; SALINITY; DROUGHT; COLD; HOMEOSTASIS; EXPRESSION; TOLERANCE9J EXP BOTJ. Exp. Bot.English47wang, yifeng/0000-0002-5187-3755GREAT CLARENDON ST, OXFORD OX2 6DP, ENGLANDMAY11OXFORD25754405JOXFORD UNIV PRESS2015Ni, J (reprint author), Hangzhou Normal Univ, Coll Life & Environm Sci, Hangzhou 310036, Zhejiang, Peoples R China.Plant Sciences0022-0957JOURNAL OF EXPERIMENTAL BOTANY1Aequorin-based luminescence imaging reveals differential calcium signalling responses to salt and reactive oxygen species in rice roots1840WOS:00035474220001466Plant Sciences1109
Two SNPs in the promoter of GS5 are responsible for expression variation controlling grain size. Enhanced expression of GS5 competitively inhibits the interaction between OsBAK1 and OsMSBP1, promoting grain size.Grain weight is a major determinant of graiXu, Chunjue; Liu, Yu; Li, Yibo; Xu, Xiaodong; Xu, Caiguo; Li, Xianghua; Xiao, Jinghua; Zhang, QifaXu, CJ; Liu, Y; Li, YB; Xu, XD; Xu, CG; Li, XH; Xiao, JH; Zhang, QF2611[Zhang, Qifa] Huazhong Agr Univ, Natl Key Lab CropYu XF, 2011, PLANT J, V65, P634, DOI 10.1111/j.1365-313X.2010.04449.x; Nam KH, 2002, CELL, V110, P203, DOI 10.1016/S0092-8674(02)00814-0; Mao HL, 2010, P NATL ACAD SCI USA, V107, P19579, DOI 10.1073/pnas.1014419107; Wang E, 2008, NAT GENET, V40, P1370, DOcis-elemen10.1093/jxArticle1460-2431qifazh@mail.hzau.edu.cn2623863 Project [2012AA10A303]; 973 Project of China [2014CB943400]; National Natural Science FoundationWe thank Professor Jian Xu from the National University of Singapore for kindly providing the pM999-CI4SBFLUORESCENT FUSION PROTEINS; SERINE-CARBOXYPEPTIDASE; TRANSIENT EXPRESSION; ARABIDOPSIS-THALIANA; NATURAL VARIATION; ALPHA-AMYLASE; ABSCISIC-ACID; MAJOR QTL; GENE; WEIGHT9J EXP BOTJ. Exp. Bot.English42GREAT CLARENDON ST, OXFORD OX2 6DP, ENGLANDMAY13OXFORD25711711JOXFORD UNIV PRESS2015Zhang, QF (reprint author), Huazhong Agr Univ, Natl Key Lab Crop Genet Improvement, Wuhan 430070, Peoples R China.Plant Sciences0022-0957JOURNAL OF EXPERIMENTAL BOTANY1Differential expression of GS5 regulates grain size in rice1122WOS:00035474220001966Plant Sciences1110
qRT9. a QTL for root thickness and root length, was cloned from upland rice. The candidate gene OsbHLH120, with two functional polymorphic sites, was identified.Breeding for strong root systems is an important strategy for improving drought avoidance in rLi, Junzhou; Han, Yingchun; Liu, Lei; Chen, Yipeng; Du, Yanxiu; Zhang, Jing; Sun, Hongzheng; Zhao, QuanzhiLi, JZ; Han, YC; Liu, L; Chen, YP; Du, YX; Zhang, J; Sun, HZ; Zhao, QZ2723[Li, Junzhou; Han, Yingchun; Liu, Lei; Chen, YipenYadav R, 1997, THEOR APPL GENET, V94, P619, DOI 10.1007/s001220050459; Al-Shugeairy Z, 2014, ANN APPL BIOL, V165, P96, DOI 10.1111/aab.12118; Nguyen HT, 1997, CROP SCI, V37, P1426; Rich SM, 2013, J EXP BOT, V64, P1193, DOI 10.1093/jxb/ert043; Price AH, 20Oryza sati10.1093/jxArticle1460-2431qzzhaoh@126.com2732National Nature Science Foundation of China [31101132]; Key Public Welfare Scientific Research ProjeThis study was supported by grants from the National Nature Science Foundation of China (31101132), CI4SBORYZA-SATIVA L.; DOUBLED-HAPLOID POPULATION; MARKER-ASSISTED SELECTION; DROUGHT RESISTANCE; SYSTEM ARCHITECTURE; QTLS; IDENTIFICATION; MORPHOLOGY; REGIMES; GENES9J EXP BOTJ. Exp. Bot.English43GREAT CLARENDON ST, OXFORD OX2 6DP, ENGLANDMAY10OXFORD25769309JOXFORD UNIV PRESS2015Zhao, QZ (reprint author), Henan Agr Univ, Collaborat Innovat Ctr Henan Grain Crops, Rice Engineer Ctr Henan Prov, Zhengzhou 450002, Peoples R China.Plant Sciences0022-0957JOURNAL OF EXPERIMENTAL BOTANY1qRT9, a quantitative trait locus controlling root thickness and root length in upland rice1629WOS:00035474220002766Plant Sciences2111
Brassinosteroids negatively regulate Fe transport and translocation in a strategy II rice plants.Brassinosteroids (BRs) are steroid hormones that modulate numerous physiological processes in plants. However, few studies have focused on the involvement of Wang, Baolan; Li, Gen; Zhang, Wen-HaoWang, BL; Li, G; Zhang, WH2749[Wang, Baolan; Li, Gen; Zhang, Wen-Hao] Chinese AcCorbesier L, 2003, J EXP BOT, V54, P2511, DOI 10.1093/jxb/erg276; Kobayashi T, 2007, P NATL ACAD SCI USA, V104, P19150, DOI 10.1073/pnas.0707010104; Morrissey J, 2009, CHEM REV, V109, P4553, DOI 10.1021/cr900112r; Green LS, 2004, PLANT PHYSIOL, V136, P252Brassinost10.1093/jxArticle1460-2431whzhang@ibcas.ac.cn2761Natural Science Foundation of China [31101594]; State Key Laboratory of Vegetation and EnvironmentalThis work was supported by the Natural Science Foundation of China (31101594) and State Key LaboratoCI4SBLONG-DISTANCE TRANSPORT; METAL-NICOTIANAMINE TRANSPORTER; IRON-DEFICIENCY RESPONSES; TRANSCRIPTION FACTOR; ARABIDOPSIS-THALIANA; CUCUMIS-SATIVUS; PLANTS; GENES; TOLERANCE; CITRATE9J EXP BOTJ. Exp. Bot.English43Zhang, Wen-Hao/0000-0003-2708-2221GREAT CLARENDON ST, OXFORD OX2 6DP, ENGLANDMAY13OXFORD25770588JOXFORD UNIV PRESS2015Zhang, Wen-Hao/B-5805-2009Zhang, WH (reprint author), Chinese Acad Sci, Inst Bot, State Key Lab Vegetat & Environm Change, Beijing 100093, Peoples R China.Plant Sciences0022-0957JOURNAL OF EXPERIMENTAL BOTANY1Brassinosteroids are involved in Fe homeostasis in rice (Oryza sativa L.)1326WOS:00035474220002966Plant Sciences1112
Protein ubiquitination is a major post-translational modification that regulates development, apoptosis; responses to environmental cues, and other processes in eukaryotes. Although several ubiquitinated proteins have been identified in rice, large-scale Xie, Xin; Kang, Houxiang; Liu, Wende; Wang, Guo-LiangXie, X; Kang, HX; Liu, WD; Wang, GL2017[Xie, Xin; Kang, Houxiang; Liu, Wende; Wang, Guo-LPeng JM, 2003, NAT BIOTECHNOL, V21, P921, DOI 10.1038/nbt849; Xu GQ, 2010, NAT BIOTECHNOL, V28, P868, DOI 10.1038/nbt.1654; Zhou B, 2006, MOL PLANT MICROBE IN, V19, P1216, DOI 10.1094/MPMI-19-1216; Manzano C, 2008, PLANT MOL BIOL, V68, P145, DOI 10.1007/spost-trans10.1021/prArticle1535-3907liuwende@caas.cn; wang.620@osu.edu2025National Natural Science Foundation of China [31272034]; 973 Project of Ministry of Science and TechWe thank Jan E. Leach and Lindsay Triplett at Colorado State University for their critical reading oCH4LJPHOSPHOENOLPYRUVATE CARBOXYLASE; PROTEIN-DEGRADATION; PROTEOMIC ANALYSIS; MASS-SPECTROMETRY; GLOBAL ANALYSIS; SALT STRESS; IDENTIFICATION; ARABIDOPSIS; NETWORKS; PLANTS5J PROTEOME RESJ. Proteome Res.English331155 16TH ST, NW, WASHINGTON, DC 20036 USAMAY9WASHINGTON25751157JAMER CHEMICAL SOC2015Liu, WD (reprint author), Chinese Acad Agr Sci, State Key Lab Biol Plant Dis & Insect Pests, Inst Plant Protect, Beijing 100193, Peoples R China.Biochemistry & Molecular Biology1535-3893JOURNAL OF PROTEOME RESEARCH3Comprehensive Profiling of the Rice Ubiquitome Reveals the Significance of Lysine Ubiquitination in Young Leaves2035WOS:00035400470000414Biochemical Research Methods3113
Phosphate (Pi) transporters mediate acquisition and transportation of Pi within plants. Here, we investigated the functions of OsPht1;4 (OsPT4), one of the 13 members of the Pht1 family in rice. Quantitative real-time RT-PCR analysis revealed strong expreZhang, Fang; Sun, Yafei; Pei, Wenxia; Jain, Ajay; Sun, Rui; Cao, Yue; Wu, Xueneng; Jiang, Tingting; Zhang, Liang; Fan, Xiaorong; Chen, Aiqun; Shen, Qirong; Xu, Guohua; Sun, ShubinZhang, F; Sun, YF; Pei, WX; Jain, A; Sun, R; Cao, Y; Wu, XN; Jiang, TT; Zhang, L; Fan, XR; Chen, AQ; Shen, QR; Xu, GH; Sun, SB556[Zhang, Fang; Sun, Yafei; Pei, Wenxia; Sun, Rui; CPreuss CP, 2010, PLANT PHYSIOL, V152, P1431, DOI 10.1104/pp.109.152009; Nagarajan VK, 2011, PLANT PHYSIOL, V156, P1149, DOI 10.1104/pp.111.174805; Zhou J, 2008, PLANT PHYSIOL, V146, P1673, DOI 10.1104/pp.107.111443; Nagy R, 2006, PLANT BIOLOGY, V8, P186, rice; phos10.1111/tpArticle1365-313Xsunshubin@njau.edu.cn569Chinese National Natural Science Foundation [31172014]; Fundamental Research Funds for the Central UThis work was supported by the Chinese National Natural Science Foundation (31172014), Fundamental RCH8LSARBUSCULAR MYCORRHIZAL SYMBIOSIS; GENE FAMILY; SINK ORGANS; TRANSPORTERS; ARABIDOPSIS; EXPRESSION; PLANTS; TRANSLOCATION; ACCUMULATION; HOMEOSTASIS4PLANT JPlant J.English35111 RIVER ST, HOBOKEN 07030-5774, NJ USAMAY14HOBOKEN25702710JWILEY-BLACKWELL2015xu, guohua/J-1840-2012Sun, SB (reprint author), Nanjing Agr Univ, State Key Lab Crop Genet & Germplasm Enhancement, Key Lab Plant Nutr & Fertilizat Low Middle Reache, Minist Agr, Nanjing 210095, Jiangsu, Peoples R China.Plant Sciences0960-7412PLANT JOURNAL4Involvement of OsPht1;4 in phosphate acquisition and mobilization facilitates embryo development in rice1425WOS:00035428850000282Plant Sciences5114
Transport of photoassimilates from leaf tissues (source regions) to the sink organs is essential for plant development. Here, we show that a phytohormone, the brassinosteroids (BRs) promotes pollen and seed development in rice by directly promoting expresZhu, Xiaolei; Liang, Wanqi; Cui, Xiao; Chen, Mingjiao; Yin, Changsong; Luo, Zhijing; Zhu, Jiaying; Lucas, William J.; Wang, Zhiyong; Zhang, DabingZhu, XL; Liang, WQ; Cui, X; Chen, MJ; Yin, CS; Luo, ZJ; Zhu, JY; Lucas, WJ; Wang, ZY; Zhang, DB570[Zhu, Xiaolei; Liang, Wanqi; Cui, Xiao; Chen, MingMao J, 2005, P NATL ACAD SCI USA, V102, P12270, DOI 10.1073/pnas.0501011102; Xing YZ, 2010, ANNU REV PLANT BIOL, V61, P421, DOI 10.1146/annurev-arplant-042809-112209; Huber SC, 1996, ANNU REV PLANT PHYS, V47, P431, DOI 10.1146/annurev.arplant.47.1.431; GRbrassinost10.1111/tpArticle1365-313Xzhangdb@sjtu.edu.cn581National Natural Science Foundation of China [31230051, 91417311, 31110103915]; China Innovative ResWe thank David M. Braun for useful comments on the manuscript. This work was supported by funds fromCH8LSSOLANUM-LYCOPERSICON L.; SOURCE-SINK RELATIONS; PLANT-GROWTH; SIGNAL-TRANSDUCTION; HORMONAL CHANGES; LEAF SENESCENCE; SHOOT GROWTH; CROP YIELD; ARABIDOPSIS; SUCROSE4PLANT JPlant J.English63Wang, Zhi-Yong/0000-0003-4602-3390111 RIVER ST, HOBOKEN 07030-5774, NJ USAMAY12HOBOKEN25754973JWILEY-BLACKWELL2015Wang, Zhi-Yong/E-3810-2012Zhang, DB (reprint author), Shanghai Jiao Tong Univ, Joint Int Res Lab Metab & Dev Sci, Shanghai Jiao Tong Univ Univ Adelaide Joint Ctr A, Sch Life Sci & Biotechnol, Shanghai 200240, Peoples R China.Plant Sciences0960-7412PLANT JOURNAL1Brassinosteroids promote development of rice pollen grains and seeds by triggering expression of Carbon Starved Anther, a MYB domain protein3349WOS:00035428850000382Plant Sciences1115
Bacterial blight of rice is caused by the -proteobacterium Xanthomonas oryzae pv. oryzae, which utilizes a group of type III TAL (transcription activator-like) effectors to induce host gene expression and condition host susceptibility. Five SWEET genes arZhou, Junhui; Peng, Zhao; Long, Juying; Sosso, Davide; Liu, Bo; Eom, Joon-Seob; Huang, Sheng; Liu, Sanzhen; Vera Cruz, Casiana; Frommer, Wolf B.; White, Frank F.; Yang, BingZhou, JH; Peng, Z; Long, JY; Sosso, D; Liu, B; Eom, JS; Huang, S; Liu, SZ; Cruz, CV; Frommer, WB; White, FF; Yang, B632[Zhou, Junhui; Long, Juying; Liu, Bo; Huang, ShengBlock A, 2008, CURR OPIN PLANT BIOL, V11, P396, DOI 10.1016/j.pbi.2008.06.007; Antony G, 2010, PLANT CELL, V22, P3864, DOI 10.1105/tpc.110.078964; Ochiai H, 2005, JARQ-JPN AGR RES Q, V39, P275; Chen LQ, 2012, SCIENCE, V335, P207, DOI 10.1126/science.12133Oryza sati10.1111/tpArticle1365-313Xfwhite@ksu.edu; byang@iastate.edu643National Science Foundation [0820831, IOS-1258103]; Grand Challenges Explorations Phase I grant BillThis research was supported by the National Science Foundation research grants 0820831 (F.F.W. and BCH8LSORYZAE PV.-ORYZAE; DISEASE-SUSCEPTIBILITY GENE; XANTHOMONAS-ORYZAE; III EFFECTORS; INDUCTION; BINDING; HOST4PLANT JPlant J.English31111 RIVER ST, HOBOKEN 07030-5774, NJ USAMAY12HOBOKEN25824104JWILEY-BLACKWELL2015White, FF (reprint author), Univ Florida, Dept Plant Pathol, Gainesville, FL 32611 USA.Plant Sciences0960-7412PLANT JOURNAL9Gene targeting by the TAL effector PthXo2 reveals cryptic resistance gene for bacterial blight of rice1026WOS:00035428850000882Plant Sciences10116
Silicon (Si) plays a large number of diverse roles in plants, but the structural and chemical mechanisms operating at the single-cell level remain unclear. We isolate the cell walls from suspension-cultured individual cells of rice (Oryza sativa) andfractHe, Congwu; Ma, Jie; Wang, LijunHe, CW; Ma, J; Wang, LJ1051[He, Congwu; Ma, Jie; Wang, Lijun] Huazhong Agr UnSCHWARZ K, 1973, P NATL ACAD SCI USA, V70, P1608, DOI 10.1073/pnas.70.5.1608; Ma JF, 2006, TRENDS PLANT SCI, V11, P392, DOI 10.1016/j.tplants.2006.06.007; BINNIG G, 1986, PHYS REV LETT, V56, P930, DOI 10.1103/PhysRevLett.56.930; Guntzer F, 2012, AGRON SUScell wall;10.1111/npArticle1469-8137ljwang@mail.hzau.edu.cn1062China National Natural Science Foundation [31172027]This work was supported by the China National Natural Science Foundation (grant no. 31172027 to L.J.CF8JCPLANT-CELL; MIXED-LINKAGE; ORYZA-SATIVA; MICROSCOPE CANTILEVERS; RHAMNOGALACTURONAN-II; CHEMICAL-COMPOSITION; PROTOPLASTS; RESOLUTION; CELLULOSE; PROTEINS3NEW PHYTOLNew Phytol.English72111 RIVER ST, HOBOKEN 07030-5774, NJ USAMAY12HOBOKEN25615017JWILEY-BLACKWELL2015Wang, LJ (reprint author), Huazhong Agr Univ, Coll Resources & Environm, Wuhan 430070, Peoples R China.Plant Sciences0028-646XNEW PHYTOLOGIST3A hemicellulose-bound form of silicon with potential to improve the mechanical properties and regeneration of the cell wall of rice1234WOS:000352802800018206Plant Sciences3117
Silicon (Si) alleviates cadmium (Cd) toxicity in rice (Oryza sativa). However, the chemical mechanisms at the single-cell level are poorly understood. Here, a suspension of rice cells exposed to Cd and/or Si treatments was investigated using a combinationMa, Jie; Cai, Hongmei; He, Congwu; Zhang, Wenjun; Wang, LijunMa, J; Cai, HM; He, CW; Zhang, WJ; Wang, LJ1063[Ma, Jie; Cai, Hongmei; He, Congwu; Zhang, Wenjun;Ma JF, 2004, SOIL SCI PLANT NUTR, V50, P11; Fujihira M, 1999, ANNU REV MATER SCI, V29, P353, DOI 10.1146/annurev.matsci.29.1.353; ZHONG HL, 1993, J EXP BOT, V44, P773, DOI 10.1093/jxb/44.4.773; Ishikawa S, 2012, P NATL ACAD SCI USA, V109, P19166, DOI 10.1cadmium (C10.1111/npArticle1469-8137ljwang@mail.hzau.edu.cn1074National Natural Science Foundation of China [31172027]This work was supported by the National Natural Science Foundation of China (grant no. 31172027) (L.CF8JCCOMPARATIVE TRANSCRIPTOME ANALYSIS; BIOTIC LIGAND MODEL; HIGHER-PLANTS; WALL POLYSACCHARIDES; ARABIDOPSIS-THALIANA; ABIOTIC STRESSES; ROOT-TIPS; ACCUMULATION; L.; TRANSPORTER3NEW PHYTOLNew Phytol.English76111 RIVER ST, HOBOKEN 07030-5774, NJ USAMAY12HOBOKEN25645894JWILEY-BLACKWELL2015Wang, LJ (reprint author), Huazhong Agr Univ, Coll Resources & Environm, Wuhan 430070, Peoples R China.Plant Sciences0028-646XNEW PHYTOLOGIST7A hemicellulose-bound form of silicon inhibits cadmium ion uptake in rice (Oryza sativa) cells4286WOS:000352802800019206Plant Sciences7118
Nuclear factor Y (NF-Y) is a ubiquitous transcription factor formed by three distinct subunits, namely NF-YA, NF-YB and NF-YC. A stress-responsive cDNA of NF-YC (Cdt-NF-YC1) was isolated from triploid bermudagrass (Cynodon dactylonxCynodon transvaalensis)Chen, Miao; Zhao, Yujuan; Zhuo, Chunliu; Lu, Shaoyun; Guo, ZhenfeiChen, M; Zhao, YJ; Zhuo, CL; Lu, SY; Guo, ZF482[Chen, Miao; Zhao, Yujuan; Zhuo, Chunliu; Lu, ShaoThirumurugan T, 2008, MOL GENET GENOMICS, V279, P279, DOI 10.1007/s00438-007-0312-3; Mu JY, 2008, PLANT PHYSIOL, V148, P1042, DOI 10.1104/pp.108.126342; Xu DP, 1996, PLANT PHYSIOL, V110, P249; Mantovani R, 1999, GENE, V239, P15, DOI 10.1016/S0378-1119(99)abiotic st10.1111/pbArticle1467-7652turflab@scau.edu.cn; zhfguo@scau.edu.cn491Natural Science Foundation of China [31172253, 30972027]; Research Fund for the Doctoral Program of This work was funded by grants from the Natural Science Foundation of China (31172253, 30972027) andCG6HQCCAAT-BINDING-FACTOR; POSITIVE REGULATOR; EMBRYO DEVELOPMENT; ABIOTIC STRESSES; WATER-DEFICIT; ARABIDOPSIS; SUBUNITS; GENES; COLD; SALT4PLANT BIOTECHNOL JPlant Biotechnol. J.English42111 RIVER ST, HOBOKEN 07030-5774, NJ USAMAY10HOBOKEN25283804JWILEY-BLACKWELL2015Lu, SY (reprint author), South China Agr Univ, State Key Lab Conservat & Utilizat Subtrop Agrobi, Guangzhou, Guangdong, Peoples R China.Biotechnology & Applied Microbiology; Plant Sciences1467-7644PLANT BIOTECHNOLOGY JOURNAL7Overexpression of a NF-YC transcription factor from bermudagrass confers tolerance to drought and salinity in transgenic rice3049WOS:00035340080000413Biotechnology & Applied Microbiology; Plant Sciences7119
Rice is a major food crop with enormous biomass residue for biofuels. As plant cell wall recalcitrance basically decides a costly biomass process, genetic modification of plant cell walls has been regarded as a promising solution. However, due to structurLi, Fengcheng; Zhang, Mingliang; Guo, Kai; Hu, Zhen; Zhang, Ran; Feng, Yongqing; Yi, Xiaoyan; Zou, Weihua; Wang, Lingqiang; Wu, Changyin; Tian, Jinshan; Lu, Tiegang; Xie, Guosheng; Peng, LiangcaiLi, FC; Zhang, ML; Guo, K; Hu, Z; Zhang, R; Feng, YQ; Yi, XY; Zou, WH; Wang, LQ; Wu, CY; Tian, JS; Lu, TG; Xie, GS; Peng, LC514[Li, Fengcheng; Zhang, Mingliang; Guo, Kai; Hu, ZhBansal P, 2010, BIORESOURCE TECHNOL, V101, P4461, DOI 10.1016/j.biortech.2010.01.068; Jung JH, 2012, PLANT BIOTECHNOL J, V10, P1067, DOI 10.1111/j.1467-7652.2012.00734.x; Li X, 2008, PLANT J, V54, P569, DOI 10.1111/j.1365-313X.2008.03457.x; Service RF, 20rice; biom10.1111/pbArticle1467-7652xiegsh@mail.hzau.edu.cn; lpeng@mail.hzau.edu.cn525111 Project of MOE [B08032]; Transgenic Plant and Animal Project of MOA [2009ZX08009-119B]; 973 Pre-We specially thank Prof. Qifa Zhang for kindly providing the rice T-DNA mutant pools. This work was CG6HQCELL-WALL BIOSYNTHESIS; BIOFUEL PRODUCTION; H2SO4 PRETREATMENTS; LIGNIN BIOSYNTHESIS; CELLULOSE SYNTHESIS; CATALYTIC SUBUNIT; POLYMER FEATURES; ARABIDOPSIS; MISCANTHUS; GENES4PLANT BIOTECHNOL JPlant Biotechnol. J.English48111 RIVER ST, HOBOKEN 07030-5774, NJ USAMAY12HOBOKEN25418842JWILEY-BLACKWELL2015Xie, GS (reprint author), Huazhong Agr Univ, Natl Key Lab Crop Genet Improvement, Wuhan, Peoples R China.Biotechnology & Applied Microbiology; Plant Sciences1467-7644PLANT BIOTECHNOLOGY JOURNAL4High-level hemicellulosic arabinose predominately affects lignocellulose crystallinity for genetically enhancing both plant lodging resistance and biomass enzymatic digestibility in rice mutants1629WOS:00035340080000713Biotechnology & Applied Microbiology; Plant Sciences4120